Genome-Wide Predictors of Survival in Colorectal Cancer
For this project, we aim to identify single nucleotide polymorphisms (SNPs) or regions associated with survival after CRC diagnosis and associated with treatment toxicity. We will utilize the identified associated variants to improve prognostic models by included genetic data to existing models. We will also explore the relationship between genetic variants, environmental exposures, and CRC survival. We will integrate tumor characteristic data, as available, into these analyses as able to better illuminate these relationships. To undertake this, we propose utilizing PLCO GWAS and sequence data, environmental data, treatment data, tumor characteristics data, and survival/outcome data. Data may be used in conjunction with other studies’ data from the Genetics & Epidemiology of Colorectal Cancer Consortium (GECCO) and from the Molecular Correlates of Outcomes in Clinical Trials project (R01-CA176272).
Ulrike Peters, Fred Hutchinson Cancer Research Center
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Genetic variants associated with circulating C-reactive protein levels and colorectal cancer survival: Sex-specific and lifestyle factors specific associations.
Huang Y, Hua X, Labadie JD, Harrison TA, Dai JY, Lindstrom S, Lin Y, Berndt SI, Buchanan DD, Campbell PT, Casey G, Gallinger SJ, Gunter MJ, Hoffmeister M, Jenkins MA, Sakoda LC, Schoen RE, Diergaarde B, Slattery ML, White E, ...show more Giles G, Brenner H, Chang-Claude J, Joshi A, Ma W, Pai RK, Chan AT, Peters U, Newcomb PA
Int J Cancer. 2022 May 1; Volume 150 (Issue 9): Pages 1447-1454 PUBMED -
Genome-wide association study identifies tumor anatomical site-specific risk variants for colorectal cancer survival.
Labadie JD , Savas S , Harrison TA , Banbury B , Huang Y , Buchanan DD , Campbell PT , Gallinger SJ , Giles GG , Gunter MJ , Hoffmeister M , Hsu L , Jenkins MA , Lin Y , Ogino S , Phipps AI , Slattery ML , Steinfelder RS , Sun W , Van Guelpen B , ...show more Hua X , Figuieredo JC , Pai RK , Nassir R , Qi L , Chan AT , Peters U , Newcomb PA
Sci Rep. 2022 Jan 7; Volume 12 (Issue 1): Pages 127 PUBMED -
A genome-wide search for determinants of survival in 1926 patients with advanced colorectal cancer with follow-up in over 22,000 patients.
Wills C, He Y, Summers MG, Lin Y, Phipps AI, Watts K, Law PJ, Al-Tassan NA, Maughan TS, Kaplan R, Houlston RS, Peters U, Newcomb PA, Chan AT, Buchanan DD, Gallinger S, Marchand LL, Pai RK, Shi Q, Alberts SR, ...show more Gray V, West HD, Escott-Price V, Dunlop MG, Cheadle JP
Eur J Cancer. 2021 Dec; Volume 159: Pages 247-258 PUBMED -
Genetically Predicted Circulating C-Reactive Protein Concentration and Colorectal Cancer Survival: A Mendelian Randomization Consortium Study.
Hua X, Dai JY, Lindström S, Harrison TA, Lin Y, Alberts SR, Alwers E, Berndt SI, Brenner H, Buchanan DD, Campbell PT, Casey G, Chang-Claude J, Gallinger S, Giles GG, Goldberg RM, Gunter MJ, Hoffmeister M, Jenkins MA, Joshi AD, ...show more Ma W, Milne RL, Murphy N, Pai RK, Sakoda LC, Schoen RE, Shi Q, Slattery ML, Song M, White E, Marchand LL, Chan AT, Peters U, Newcomb PA
Cancer Epidemiol Biomarkers Prev. 2021 Jul; Volume 30 (Issue 7): Pages 1349-1358 PUBMED