Polyamine Metabolism in Breast Cancer
We would therefore like to access to the metabolomics data from the published study: Chang VC, Rhee J, Berndt SI, et al. Serum perfluorooctane sulfonate and perfluorooctanoate and risk of postmenopausal breast cancer according to hormone receptor status: An analysis in the Prostate, Lung, Colorectal and Ovarian Cancer Screening Trial. Int J Cancer. 2023;153(4): 775‐782. doi:10.1002/ijc.34487
Given the sinificant power of the PLCO cohort, accessing the metabolomics data would be incredibly valuable for our research. This analysis could provide crucial insights and potentially lead to the identification of novel biomarkers.
• Detection of Polyamines and Acetylated Polyamines in the Cohort
As an initial goal, we aim to investigate whether polyamines and their acetylated derivatives are present and measured within this specific cohort. Establishing the presence or absence of both polyamines and their acetylated forms is an essential prerequisite for all subsequent quantitative and correlative analyses.
• Correlation of Polyamine Levels with Cancer Progression and Clinical Parameters
Beyond confirming presence, it is of particular interest to assess whether the levels of polyamines and acetylated polyamines show statistically significant relationships with cancer growth dynamics or other clinically relevant factors. This will involve performing rigorous data analyses to evaluate correlations between biomarker concentrations and variables such as tumor size, disease stage, progression, treatment response, and patient outcomes, as well as other metabolic or demographic parameters.
• Estimating Ratios to Infer Synthesis and Metabolic Activity
We are also interested in calculating the ratios of parent polyamines to their metabolic derivatives (such as acetylated or otherwise transformed forms). The primary objective here is to use these ratios as proxies for the relative rates of polyamine synthesis versus metabolism within the cohort. By establishing these metabolic indices, we can investigate whether variations in polyamine turnover are linked to the development, progression, or severity of disease or to other clinical or biochemical markers. Furthermore, the correlations between these calculated ratios and relevant clinical parameters will be explored to determine if such indices could serve as useful biomarkers for disease status, prognosis, or therapeutic response.
• Additional Analytical Considerations
Where possible, we plan to stratify data by patient subgroups (e.g., based on treatment regimens, age groups, or other relevant demographics) in order to further elucidate potential patterns or associations that could be masked in aggregate analyses. Results will be rigorously validated through appropriate statistical methods to ensure robustness and reproducibility of any observed relationships between polyamine biochemistry and clinical characteristics.
Benson, Gretchen, NCI, DCEG, gierachg@mail.nih.gov
Harris, Alexandra, NCI, DCEG, alexandra.harris2@nih.gov
Wink, David , NCI, CIL, wink@mail.nih.gov
Micheal Vitek, Duke Department of Neurology ,mikevitek@cognosci.com