The interaction between sex and germline genetics on the risk of pancreatic cancer
We are exploring how sex interacts with germline genetic variation to impact pancreatic cancer risk. To do so, we are re-analyzing genetic data from patients with and without pancreatic cancer using statistical genetics approaches. Previous analyses have considered male and female patients and controls as a homogeneous group. In the present research, we are considering sex as a biological variable that can impact the genetic basis of disease susceptibility.
We will characterize sex differences in the heritable genetic component of pancreatic cancer. We hypothesize that the genetic architecture of susceptibility may differ between males and females. Utilizing data from genome-wide association studies of pancreatic cancer susceptibility, we will test multiple models to test for sexually dimorphic genetic architecture through the following Aims:
Aim 1. Conduct sex-stratified genome-wide association studies for pancreatic cancer susceptibility. This will include re-analysis of a) PanScan genome-wide germline genetic data that was part of a multi-stage genome-wide association study (GWAS) of pancreatic cancer conducted within the framework of the NCI Cohort Consortium, and b) a meta-analysis with the Pancreatic Cancer Case-Control Consortium (PanC4).
Aim 2. Test for sex differences in the genetic basis of pancreatic cancer susceptibility. This will involve: a) Testing for evidence of sexually dimorphic liability thresholds, where one sex requires a greater polygenic burden to achieve disease; b) Testing for specific susceptibility or protective factors encoded on the X or Y chromosome that differentially affect the sexes; c) Determining genetic correlation between male-only and female-only GWASes.
To support this research, we have already obtained approval and accessed PanScan and PLCO genotype data from dbGaP.
Lorenzo Pesce (Northwestern University Feinberg School of Medicine)
Banabithi Bose (Northwestern University Feinberg School of Medicine)