Reproducibility and external validation of epidemiological risk models for endometrial cancer
Despite EC being the most common gynecological malignancy, only a few population-based epidemiological models have been proposed to predict a woman’s absolute risk of an EC diagnosis using risk factors (10). The first model was developed by Pfeiffer et al (11) in 2013 from two large prospective population-based United States cohorts (Prostate, Lung, Colorectal, and Ovarian Cancer (PLCO) and NIH-AARP cohorts) of non-hispanic, white women aged 50+. The second model was developed by Hüsing et al (12) in 2015 using a large dataset of women without hysterectomy or prevalent cancer from a European Prospective Investigation into Cancer and Nutrition cohort (EPIC). Both models resulted in a prediction of the individual’s absolute risk of developing invasive EC. Recently, a machine learning model was proposed using the PLCO cancer screening trial data (Hart et al (13)). Both models by Pfeiffer and Hüsing et al, that used traditional epidemiological approaches scored in internal validation an AUC of 0.68 and 0.77 respectively, while the Hart model achieved a much higher AUC of 0.96. These models if externally validated to accurately predict an individual’s absolute risk could potentially help identify populations that benefit from prophylactic interventions or who can be directed to screening for early detection of cancer.
. Study purpose:
Our team has recently obtained funding to validate these three models in a Canadian population (CanPath). Furthermore, we want to compare the performance of these models in datasets that were not used to derive them. The Pfeiffer and Husing models are reproducible from the publications, however, the Hart model isn’t. In this study, we would like to request the PLCO data to reproduce the Hart model (13) and to validate the Hüsing model (12).
. Specific aims:
Using the PLCO dataset, we plan to undertake a study to achieve the following two aims:
Aim 1: Reproduce Hart model parameters so that we can validate it in an independent cohort.
Aim 2: Evaluate the Husing model on the PLCO data.
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1. Gillian Hanley
Email: gillian.hanley@vch.ca
Role: Epidemiologist
2. Lecuyer Mathias
Email: mathias.lecuyer@ubc.ca
Role: Computer Scientist
3. Chiu Derek
Email: dchiu@bccrc.ca
Role: Statistical Analyst