The Lung EArly Proteins (LEAP) Project
Current work by our group, within the framework of an NCI-funded U19 project, is finalizing the design of the LEAP panel for early lung cancer detection. Our full discovery phase analyzed 1,158 annotated proteins in pre-diagnostic plasma samples collected up to 3 years before diagnosis among 504 lung cancer cases and matched controls. A targeted discovery step measured 481 of these proteins among 954 additional samples. Separately, we measured 1,081 proteins among 338 individuals who had malignant or benign nodules detected during lung cancer screening. Following excellent replication of proteins identified in the full discovery, we have selected 21 proteins to include on the LEAP panel, whose technical design is planned for completion in December 2021.
Our overarching objective is to carry out two targeted, late-stage translational studies to evaluate the potential to implement the panel in two scenarios. The specific role of PLCO in this project will be to determine whether within-person changes in proteins over time can better predict lung cancer than a single measurement. The development cohort will analyze pre-diagnostic blood samples from lung cancer cases and randomly sampled controls from the Prostate, Lung, and Ovarian Cancer Screening Trial (PLCO), with up to 5 measurements per participant. The validation cohort will analyze pre-diagnostic blood samples from cases and randomly sampled controls from the Carotene and Retinol Efficacy Trial (CARET) cohort, also with up to 5 measurements per participant. The performance of a repeat-measures model will be compared with a model that includes only a single timepoint.
Aim 1: Determine whether within-person changes in protein markers over time can better predict development of lung cancer than a single measurement.
The development cohort will analyze pre-diagnostic blood samples from lung cancer cases and randomly sampled controls from the Prostate, Lung, and Ovarian Cancer Screening Trial (PLCO), with up to 5 measurements per participant. The validation cohort will analyze pre-diagnostic blood samples from cases and randomly sampled controls from the Carotene and Retinol Efficacy Trial (CARET) cohort, also with up to 5 measurements per participant. The performance of a repeat-measures model will be compared with a model that includes only a single timepoint.
Hilary Robbins (International Agency for Research on Cancer (IARC))
Mattias Johansson (International Agency for Research on Cancer (IARC))
Jon Steingrimsson (Brown University School of Public Health)
Chu Chen (Fred Hutchinson Cancer Research Center)
- Addition of case-control samples for lung cancer in never smokers