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Principal Investigator
Name
Miranda Kirby
Degrees
Ph.D
Institution
Toronto Metropolitan University
Position Title
Assistant Professor
Email
About this CDAS Project
Study
NLST (Learn more about this study)
Project ID
NLST-1019
Initial CDAS Request Approval
Feb 28, 2023
Title
Rad-Ens: Texture-based Radiomics Machine Learning and Deep Learning Ensemble for COPD Classification using CT Images
Summary
Chronic obstructive pulmonary disease (COPD) is a progressive lung disease that is characterized by airflow limitation. The goal of COPD management is early detection to allow early treatment initiation to slow the disease progression. Computed tomography (CT) images can be obtained to detect abnormalities in the lung and to monitor COPD. Although COPD is diagnosed by spirometry, which measures lung function, it is unable to detect early structural changes and is not always acquired with lung CT images, for example in lung cancer screening trials and radiation treatment planning. To utilize CT images, machine learning (ML) and deep learning (DL) models have been used to classify COPD. However, COPD classification is more challenging in mild COPD with more subtle disease changes in the lung. We propose an ensemble of a texture-based radiomics ML and DL model, Rad-Ensbinary, for classifying binary COPD and Rad-Ensmulti for classifying COPD severity. These models will be tested using participants from Canadian Cohort Obstructive Lung Disease (CanCOLD), a multicenter population-based study of mainly mild COPD participants. For the machine learning model, 95 texture-based radiomics features will be extracted from the CT images and used with a feature selection method to select the top 5 features and a machine learning classifier for the predictions. For the deep learning model, a 3D VGG model will be utilized with 15 slices per subject. To create the RadEns models, the machine learning and deep learning outcome probabilities will be combined. Then to compare the performance of the machine learning, deep learning and Rad-Ens models, DeLong's test will be used. These Rad-Ens models may have the potential to be a computer-aided diagnosis (CAD) application that can be implemented when CT images are available. This would allow for COPD detection in those with undiagnosed COPD that undergo CT images and do not acquire spirometry.
Aims

- To develop a binary texture-based radiomics machine learning and deep learning ensemble model for detecting COPD in CT images with improved performance compared to machine learning and deep learning alone.
- To develop a multi-class texture-based radiomics machine learning and deep learning ensemble model for classifying COPD severity in CT images with improved performance compared to machine learning and deep learning alone.
- To evaluate the binary and multi-class Rad-Ens classification models with an external validation cohort to test the models generalizability.

Collaborators

Sara Rezvanjou, Toronto Metropolitan University, Toronto ON M5B2K3, Canada
James C. Hogg, Center for Heart, Lung Innovation, University of British Columbia, Vancouver BC V6Z1Y6, Canada
Jean Bourbeau, Montreal Chest Institute of the Royal Victoria Hospital, McGill University Health Centre, Montreal QC H4A3J1, Canada
Wan C. Tan, Center for Heart, Lung Innovation, University of British Columbia, Vancouver BC V6Z1Y6, Canada
Miranda Kirby, Toronto Metropolitan University, Toronto ON M5B2K3, Canada