Novel Patient-Specific Hybrid Modeling for Personalized Early Detection of Cancer using Blood-Based Biomarkers
Principal Investigator
Name
Ray Han
Degrees
Ph.D.
Institution
Peking University
Position Title
Professor
Email
About this CDAS Project
Study
PLCO
(Learn more about this study)
Project ID
PLCO-461
Initial CDAS Request Approval
Mar 21, 2019
Title
Novel Patient-Specific Hybrid Modeling for Personalized Early Detection of Cancer using Blood-Based Biomarkers
Summary
The early detection of cancers is of paramount importance as a cure is still possible through a surgical resection of the tumor. To achieve this goal, one plausible method is to exploit blood-based biomarkers complimented with mathematical modeling such that the earliest detectable time of a tumor by current imaging modalities can be predicted. Although promising, the parameterization of the mathematical model to each individual patient requires at least 3 measurements of the biomarker at 3 different time points, or in current clinical practices, predictions can only be made after 3 years of screening. This limitation limits the clinical utility of the mathematical model. In this project, we wish to address this limitation by developing a novel hybrid model that combines machine learning and mathematical models so that prediction can be done with only one biomarker measurement and the risk factors of the patient. Utilizing the serial PSA and CA125 data in the PLCO dataset, associations between the cancer risk factors and parameters will be learned through machine learning and subsequently, the predicted parameter will be fed into the mathematical model to enable a personalized detection of cancer. The performance of this hybrid model will be compared to existing longitudinal algorithms such as the method of mean trends (MMT) and the parametric empirical Bayes (PEB), as well as with the single thresholding method.
Aims
1) Obtain patient-specific parameters by fitting the mathematical model to the longitudinal biomarker data
2) Develop a machine learning model to predict parameters based on the cancer risk factors of the patients
3) Develop a hybrid model by combining both the mathematical and machine learning models and evaluate its performance on the early detection of cancer.
Collaborators
Kok Suen Cheng, Peking University